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| 22.09.2016 | 06:00 | Grulla Morioka | - | Honda FC | 1:2 | |
| 07:00 | Albirex Niigata | - | Renofa Yamaguchi | 1:0 | ||
| 08:00 | Oita Trinita | - | Shimizu S-Pulse | 0:1 | ||
| 08:00 | Kashima Antlers | - | Fagiano Okayama | 2:1 | ||
| 08:00 | Vissel Kobe | - | Montedio Yamagata | 5:3 (2:0, 3:3, 3:3) tab | ||
| 09:00 | RB Omiya Ardija | - | Júbilo Iwata | 5:0 | ||
| 09:00 | Yokohama F. Marinos | - | Tokyo Verdy | 4:0 | ||
| 11:00 | Kawasaki Frontale | - | JEF United Chiba | 4:1 ap | ||
| 12:00 | Shonan Bellmare | - | Tokushima Vortis | 4:0 | ||
| 12:00 | AC Nagano Parceiro | - | Yokohama FC | 2:3 ap | ||
| 12:00 | Kashiwa Reysol | - | Ehime FC | 1:0 ap | ||
| 12:00 | Sagan Tosu | - | Cerezo Osaka | 2:0 |
