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| 30.01.1999 | FC Barcelona B | - | RCD Mallorca B | 1:2 | ||
| SD Eibar | - | Málaga CF | 0:0 | |||
| CD Leganés | - | UE Lleida | 1:0 | |||
| Recreativo Huelva | - | SD Compostela | 1:1 | |||
| 31.01.1999 | CP Mérida | - | CD Numancia | 2:0 | ||
| CD Badajoz | - | CD Logroñés | 2:1 | |||
| Hércules CF | - | Atlético Madrid B | 1:3 | |||
| CD Toledo | - | Sporting Gijón | 2:5 | |||
| CA Osasuna | - | Rayo Vallecano | 1:1 | |||
| CD Ourense | - | Sevilla FC | 2:3 | |||
| Albacete | - | UD Las Palmas | 1:0 |
| » Classement | équipe recevante | à l'extérieur | Premier tour | Second tour |
| # | Équipe | M. | G. | N. | P. | Buts | Diff. | Pts. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
CD Numancia | 22 | 12 | 4 | 6 | 39:20 | 19 | 40 |
| 2 |
|
Málaga CF | 22 | 11 | 7 | 4 | 34:24 | 10 | 40 |
| 3 |
|
Rayo Vallecano | 22 | 10 | 9 | 3 | 33:29 | 4 | 39 |
| 4 |
|
UD Las Palmas | 22 | 10 | 8 | 4 | 34:19 | 15 | 38 |
| 5 |
|
CA Osasuna | 22 | 10 | 8 | 4 | 30:17 | 13 | 38 |
| 6 |
|
CD Toledo | 22 | 10 | 6 | 6 | 30:27 | 3 | 36 |
| 7 |
|
CP Mérida | 22 | 9 | 6 | 7 | 25:18 | 7 | 33 |
| 8 |
|
Recreativo Huelva | 22 | 9 | 6 | 7 | 20:16 | 4 | 33 |
| 9 |
|
Sevilla FC | 22 | 9 | 6 | 7 | 28:27 | 1 | 33 |
| 10 |
|
SD Compostela | 22 | 8 | 8 | 6 | 30:23 | 7 | 32 |
| 11 |
|
Atlético Madrid B | 22 | 8 | 8 | 6 | 35:29 | 6 | 32 |
| 12 |
|
UE Lleida | 22 | 8 | 8 | 6 | 25:21 | 4 | 32 |
| 13 |
|
CD Logroñés | 22 | 8 | 7 | 7 | 31:32 | -1 | 31 |
| 14 |
|
RCD Mallorca B | 22 | 9 | 3 | 10 | 28:31 | -3 | 30 |
| 15 |
|
CD Badajoz | 22 | 7 | 6 | 9 | 19:19 | 0 | 27 |
| 16 |
|
Albacete | 22 | 7 | 6 | 9 | 17:21 | -4 | 27 |
| 17 |
|
CD Leganés | 22 | 6 | 7 | 9 | 20:27 | -7 | 25 |
| 18 |
|
Sporting Gijón | 22 | 5 | 7 | 10 | 19:28 | -9 | 22 |
| 19 |
|
Hércules CF | 22 | 6 | 4 | 12 | 21:35 | -14 | 22 |
| 20 |
|
SD Eibar | 22 | 5 | 4 | 13 | 15:31 | -16 | 19 |
| 21 |
|
CD Ourense | 22 | 4 | 3 | 15 | 19:42 | -23 | 15 |
| 22 |
|
FC Barcelona B | 22 | 3 | 5 | 14 | 23:39 | -16 | 14 |
