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| 04.04.2009 | 16:00 | Cheltenham Town | - | Leyton Orient | 0:1 (0:1) | |
| 16:00 | Colchester United | - | Leeds United | 0:1 (0:1) | ||
| 16:00 | Hartlepool United | - | Hereford United | 4:2 (2:2) | ||
| 16:00 | Huddersfield Town | - | Southend United | 0:1 (0:0) | ||
| 16:00 | Leicester City | - | Carlisle United | 2:2 (0:1) | ||
| 16:00 | Millwall FC | - | Walsall FC | 3:1 (2:1) | ||
| 16:00 | Milton Keynes Dons | - | Brighton & Hove Albion | 2:0 (2:0) | ||
| 16:00 | Oldham Athletic | - | Peterborough United | 1:2 (1:1) | ||
| 16:00 | Stockport County | - | Yeovil Town | 0:0 (0:0) | ||
| 16:00 | Swindon Town | - | Crewe Alexandra | 0:0 (0:0) | ||
| 05.04.2009 | 16:00 | Tranmere Rovers | - | Bristol Rovers | 2:0 (1:0) | |
| 21.04.2009 | 20:45 | Northampton Town | - | Scunthorpe United | 3:3 (1:1) |
| » Classement | équipe recevante | à l'extérieur | Premier tour | Second tour |
| # | Équipe | M. | G. | N. | P. | Buts | Diff. | Pts. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Leicester City | 41 | 23 | 14 | 4 | 73:36 | 37 | 83 |
| 2 |
|
Peterborough United | 41 | 24 | 9 | 8 | 73:49 | 24 | 81 |
| 3 |
|
Millwall FC | 41 | 23 | 7 | 11 | 57:44 | 13 | 76 |
| 4 |
|
Milton Keynes Dons | 41 | 22 | 9 | 10 | 77:45 | 32 | 75 |
| 5 |
|
Leeds United | 41 | 22 | 6 | 13 | 69:47 | 22 | 72 |
| 6 |
|
Scunthorpe United | 41 | 21 | 8 | 12 | 75:55 | 20 | 71 |
| 7 |
|
Tranmere Rovers | 41 | 19 | 9 | 13 | 56:43 | 13 | 66 |
| 8 |
|
Southend United | 41 | 19 | 7 | 15 | 52:54 | -2 | 64 |
| 9 |
|
Oldham Athletic | 41 | 15 | 14 | 12 | 60:58 | 2 | 59 |
| 10 |
|
Stockport County | 41 | 15 | 12 | 14 | 54:49 | 5 | 57 |
| 11 |
|
Colchester United | 41 | 16 | 9 | 16 | 53:54 | -1 | 57 |
| 12 |
|
Huddersfield Town | 41 | 15 | 12 | 14 | 53:59 | -6 | 57 |
| 13 |
|
Walsall FC | 41 | 15 | 10 | 16 | 55:59 | -4 | 55 |
| 14 |
|
Bristol Rovers | 41 | 14 | 12 | 15 | 68:54 | 14 | 54 |
| 15 |
|
Leyton Orient | 41 | 13 | 10 | 18 | 39:50 | -11 | 49 |
| 16 |
|
Yeovil Town | 41 | 11 | 14 | 16 | 36:59 | -23 | 47 |
| 17 |
|
Hartlepool United | 41 | 12 | 10 | 19 | 60:69 | -9 | 46 |
| 18 |
|
Swindon Town | 41 | 10 | 15 | 16 | 60:64 | -4 | 45 |
| 19 |
|
Carlisle United | 41 | 11 | 11 | 19 | 51:65 | -14 | 44 |
| 20 |
|
Crewe Alexandra | 41 | 12 | 8 | 21 | 54:72 | -18 | 44 |
| 21 |
|
Northampton Town | 41 | 10 | 13 | 18 | 54:56 | -2 | 43 |
| 22 |
|
Brighton & Hove Albion | 41 | 10 | 12 | 19 | 46:64 | -18 | 42 |
| 23 |
|
Hereford United | 41 | 9 | 7 | 25 | 39:69 | -30 | 34 |
| 24 |
|
Cheltenham Town | 41 | 7 | 10 | 24 | 46:86 | -40 | 31 |
| Promotion | |
| Play-off | |
| Relégation |
